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[Unofficial] XSQ Tools runs on Ubuntu Linux 11.04

Posted by jacob on Sep 19, 2011 2:20:14 AM

Hi,

 

I made some fixes to the code (ldd issues, env vars..etc) of the shell script "convertFromXSQ.sh".

 

convertFromXSQ.sh shell script try to find $XSQ_TOOLS environment  variable first, if $XSQ_TOOLS is defined then set rootDir  variable.

 

Ubuntu Linux 11.04 (Natty) (glibc 2.13)

 

Step 1. Converting XSQ to CSFASTA/QUAL

(clic screenshots)

 

xsqtoolsubuntunatty.png

Step 2. Results

xsqtools2u.png

563 Views Tags: bioinformatics, xsq, csfasta, qual, solid_5500, solid


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